STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570385_04808Unannotated protein. (387 aa)    
Predicted Functional Partners:
GCA_001570385_00902
Unannotated protein.
 
  
 0.990
GCA_001570385_05439
Unannotated protein.
 
 
 0.985
GCA_001570385_07480
Unannotated protein.
 
 
 0.969
GCA_001570385_04810
Unannotated protein.
 
   
 0.948
GCA_001570385_02996
Unannotated protein.
 
   
 0.944
GCA_001570385_01234
Unannotated protein.
 
 
 0.942
GCA_001570385_05309
Unannotated protein.
 
   
 0.933
GCA_001570385_04292
Unannotated protein.
  
  
 0.772
GCA_001570385_00089
Unannotated protein.
  
 
 0.746
GCA_001570385_06204
Unannotated protein.
  
 
 0.722
Your Current Organism:
Microtetraspora glauca
NCBI taxonomy Id: 1996
Other names: ATCC 23057, DSM 43311, IFO 14761, JCM 3300, M. glauca, NBRC 14761, NRRL B-3735, VKM Ac-663
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.