STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570385_07841Unannotated protein. (194 aa)    
Predicted Functional Partners:
GCA_001570385_07842
Unannotated protein.
 
     0.858
GCA_001570385_07843
Unannotated protein.
 
   
 0.785
GCA_001570385_05596
Unannotated protein.
 
     0.710
GCA_001570385_02653
Unannotated protein.
  
   
 0.601
GCA_001570385_01558
Unannotated protein.
  
     0.595
GCA_001570385_03807
Unannotated protein.
    
  0.487
GCA_001570385_06835
Unannotated protein.
  
 
 0.425
GCA_001570385_07681
Unannotated protein.
  
 
 0.425
GCA_001570385_05551
Unannotated protein.
  
     0.401
Your Current Organism:
Microtetraspora glauca
NCBI taxonomy Id: 1996
Other names: ATCC 23057, DSM 43311, IFO 14761, JCM 3300, M. glauca, NBRC 14761, NRRL B-3735, VKM Ac-663
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.