STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570385_07869Unannotated protein. (220 aa)    
Predicted Functional Partners:
GCA_001570385_07870
Unannotated protein.
   
 0.991
GCA_001570385_07864
Unannotated protein.
 
   
 0.914
GCA_001570385_07867
Unannotated protein.
 
     0.902
GCA_001570385_00766
Unannotated protein.
 
   
 0.756
GCA_001570385_07868
Unannotated protein.
       0.625
GCA_001570385_07866
Unannotated protein.
       0.554
GCA_001570385_07871
Unannotated protein.
       0.510
GCA_001570385_04262
Unannotated protein.
  
     0.423
GCA_001570385_07865
Unannotated protein.
       0.401
Your Current Organism:
Microtetraspora glauca
NCBI taxonomy Id: 1996
Other names: ATCC 23057, DSM 43311, IFO 14761, JCM 3300, M. glauca, NBRC 14761, NRRL B-3735, VKM Ac-663
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.