STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570385_08170Unannotated protein. (436 aa)    
Predicted Functional Partners:
GCA_001570385_00850
Unannotated protein.
  
     0.624
GCA_001570385_04283
Unannotated protein.
    
 0.540
GCA_001570385_04282
Unannotated protein.
     
 0.531
GCA_001570385_04281
Unannotated protein.
     
 0.530
GCA_001570385_00092
Unannotated protein.
     
 0.528
GCA_001570385_03196
Unannotated protein.
    
  0.509
GCA_001570385_03329
Unannotated protein.
    
  0.509
GCA_001570385_01548
Unannotated protein.
 
     0.432
GCA_001570385_01542
Unannotated protein.
  
     0.425
GCA_001570385_08171
Unannotated protein.
       0.416
Your Current Organism:
Microtetraspora glauca
NCBI taxonomy Id: 1996
Other names: ATCC 23057, DSM 43311, IFO 14761, JCM 3300, M. glauca, NBRC 14761, NRRL B-3735, VKM Ac-663
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.