STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX94536.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
SCX94392.1
Hypothetical protein.
       0.773
SCX94415.1
Hypothetical protein.
       0.773
SCX94459.1
Hypothetical protein.
       0.773
SCX94481.1
Hypothetical protein.
       0.773
SCX94509.1
Hypothetical protein.
       0.773
SCX94566.1
Hypothetical protein.
       0.773
SCX94602.1
Hypothetical protein.
       0.773
SCX94629.1
Polysaccharide lyase.
       0.773
SCX94262.1
Phage protein, HK97 gp10 family.
       0.628
SCX94293.1
Tape measure domain-containing protein.
       0.628
Your Current Organism:
Nitrosospira sp. Nl5
NCBI taxonomy Id: 200120
Other names: N. sp. Nl5, Nitrosolobus sp. Nl5
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.