STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY04817.1Phosphate-selective porin OprO and OprP. (432 aa)    
Predicted Functional Partners:
SCY00994.1
Methyltransferase, FkbM family.
  
     0.752
SCY04144.1
Hypothetical protein.
  
    0.738
SCY27960.1
Ammonia monooxygenase subunit C.
  
     0.737
SCX90754.1
PEP-CTERM protein-sorting domain-containing protein.
  
     0.711
SCX88114.1
Hypothetical protein.
  
     0.702
SCY62597.1
Alginate export.
  
     0.697
SCY09292.1
Hypothetical protein.
  
     0.662
SCY76446.1
PEP-CTERM protein-sorting domain-containing protein.
  
     0.661
SCY75871.1
Hypothetical protein.
  
     0.657
SCY45335.1
Hypothetical protein.
  
     0.647
Your Current Organism:
Nitrosospira sp. Nl5
NCBI taxonomy Id: 200120
Other names: N. sp. Nl5, Nitrosolobus sp. Nl5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.