STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY65227.1HxxPF-repeated domain-containing protein. (526 aa)    
Predicted Functional Partners:
SCY65204.1
Acyl transferase domain-containing protein.
 0.999
SCY60796.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
 0.997
SCY65110.1
MbtH protein.
 
 0.984
SCY66231.1
acyl-CoA ligase (AMP-forming), exosortase A-associated.
  0.958
SCY81973.1
Non-ribosomal peptide synthase domain TIGR01720.
 
 
0.952
SCY76053.1
fatty-acyl-CoA synthase.
  0.950
SCY65181.1
Amino acid adenylation domain-containing protein.
 
0.948
SCY65156.1
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
 0.933
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
  
 0.918
SCY65130.1
Surfactin synthase thioesterase subunit.
 
 
 0.899
Your Current Organism:
Nitrosospira sp. Nl5
NCBI taxonomy Id: 200120
Other names: N. sp. Nl5, Nitrosolobus sp. Nl5
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