Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY06104.1 | SDY27949.1 | SAMN05421754_1001227 | SAMN05421754_100565 | Sulfide:quinone oxidoreductase. | Uncharacterized iron-regulated membrane protein. | 0.511 |
SDY06104.1 | SDY70362.1 | SAMN05421754_1001227 | SAMN05421754_101838 | Sulfide:quinone oxidoreductase. | TIGR01244 family protein. | 0.599 |
SDY06104.1 | SDZ13217.1 | SAMN05421754_1001227 | SAMN05421754_10682 | Sulfide:quinone oxidoreductase. | Hypothetical protein. | 0.902 |
SDY22570.1 | SDY26327.1 | SAMN05421754_100427 | SAMN05421754_100513 | RNA polymerase sigma-70 factor, ECF subfamily. | Tfp pilus assembly protein PilF. | 0.785 |
SDY22570.1 | SDY27949.1 | SAMN05421754_100427 | SAMN05421754_100565 | RNA polymerase sigma-70 factor, ECF subfamily. | Uncharacterized iron-regulated membrane protein. | 0.544 |
SDY22570.1 | SDY83249.1 | SAMN05421754_100427 | SAMN05421754_102445 | RNA polymerase sigma-70 factor, ECF subfamily. | Iron complex outermembrane recepter protein. | 0.404 |
SDY26327.1 | SDY22570.1 | SAMN05421754_100513 | SAMN05421754_100427 | Tfp pilus assembly protein PilF. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.785 |
SDY26327.1 | SDY27949.1 | SAMN05421754_100513 | SAMN05421754_100565 | Tfp pilus assembly protein PilF. | Uncharacterized iron-regulated membrane protein. | 0.461 |
SDY26327.1 | SDY83249.1 | SAMN05421754_100513 | SAMN05421754_102445 | Tfp pilus assembly protein PilF. | Iron complex outermembrane recepter protein. | 0.454 |
SDY27949.1 | SDY06104.1 | SAMN05421754_100565 | SAMN05421754_1001227 | Uncharacterized iron-regulated membrane protein. | Sulfide:quinone oxidoreductase. | 0.511 |
SDY27949.1 | SDY22570.1 | SAMN05421754_100565 | SAMN05421754_100427 | Uncharacterized iron-regulated membrane protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.544 |
SDY27949.1 | SDY26327.1 | SAMN05421754_100565 | SAMN05421754_100513 | Uncharacterized iron-regulated membrane protein. | Tfp pilus assembly protein PilF. | 0.461 |
SDY27949.1 | SDY60071.1 | SAMN05421754_100565 | SAMN05421754_101458 | Uncharacterized iron-regulated membrane protein. | Outer membrane protein, cobalt-zinc-cadmium efflux system. | 0.421 |
SDY27949.1 | SDY70362.1 | SAMN05421754_100565 | SAMN05421754_101838 | Uncharacterized iron-regulated membrane protein. | TIGR01244 family protein. | 0.434 |
SDY27949.1 | SDY76859.1 | SAMN05421754_100565 | SAMN05421754_102111 | Uncharacterized iron-regulated membrane protein. | Cytochrome c. | 0.434 |
SDY27949.1 | SDY83249.1 | SAMN05421754_100565 | SAMN05421754_102445 | Uncharacterized iron-regulated membrane protein. | Iron complex outermembrane recepter protein. | 0.484 |
SDY27949.1 | SDZ13217.1 | SAMN05421754_100565 | SAMN05421754_10682 | Uncharacterized iron-regulated membrane protein. | Hypothetical protein. | 0.619 |
SDY60071.1 | SDY27949.1 | SAMN05421754_101458 | SAMN05421754_100565 | Outer membrane protein, cobalt-zinc-cadmium efflux system. | Uncharacterized iron-regulated membrane protein. | 0.421 |
SDY70362.1 | SDY06104.1 | SAMN05421754_101838 | SAMN05421754_1001227 | TIGR01244 family protein. | Sulfide:quinone oxidoreductase. | 0.599 |
SDY70362.1 | SDY27949.1 | SAMN05421754_101838 | SAMN05421754_100565 | TIGR01244 family protein. | Uncharacterized iron-regulated membrane protein. | 0.434 |
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