STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY37779.1Hypothetical protein. (57 aa)    
Predicted Functional Partners:
SDY37803.1
DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily.
       0.773
SDY37824.1
Hypothetical protein.
       0.773
SDY37754.1
Hypothetical protein.
       0.709
SDY37726.1
Hypothetical protein.
       0.668
SDY37705.1
Hypothetical protein.
       0.641
SDY37849.1
Phage-related protein.
       0.482
SDY37879.1
Predicted DNA-binding protein, contains XRE-type HTH domain.
       0.482
SDY37645.1
Helix-turn-helix domain of resolvase.
       0.432
SDY37671.1
PD-(D/E)XK nuclease superfamily protein.
       0.432
Your Current Organism:
Nitrosomonas sp. Nm58
NCBI taxonomy Id: 200126
Other names: N. sp. Nm58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.