STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY42060.1TonB-dependent receptor. (1085 aa)    
Predicted Functional Partners:
SDY41998.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 0.982
SDY30035.1
Protein TonB.
  
 0.903
SDY72240.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 0.903
SDY87708.1
Colicin import membrane protein.
  
 0.903
SDY41912.1
Biopolymer transport protein ExbB.
 
 
  0.892
SDY42086.1
Hypothetical protein.
 
   
 0.883
SDY41881.1
Protein of unknown function.
 
     0.842
SDY41942.1
Biopolymer transport protein ExbB.
 
 
  0.804
SDY41976.1
Biopolymer transport protein ExbD.
 
 
 0.790
SDY74466.1
Hypothetical protein.
  
 
   0.673
Your Current Organism:
Nitrosomonas sp. Nm58
NCBI taxonomy Id: 200126
Other names: N. sp. Nm58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.