STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY52616.1Type IV pilus assembly protein PilX. (181 aa)    
Predicted Functional Partners:
SDY52582.1
Type IV pilus assembly protein PilY1.
 
  
 0.992
SDY52654.1
Type IV pilus assembly protein PilW.
 
  
 0.989
SDY52687.1
Type IV pilus assembly protein PilV.
 
  
 0.988
SDY52548.1
Type IV pilus assembly protein PilE.
 
  
 0.964
SDY52722.1
Type IV fimbrial biogenesis protein FimT.
 
  
 0.964
SDY46242.1
Type IV pilus assembly protein PilP.
  
  
 0.667
SDY03930.1
General secretion pathway protein G.
  
  
 0.658
SDY79602.1
LysM domain-containing protein.
  
     0.610
SDY49921.1
Protein of unknown function.
  
   
 0.576
SDY46300.1
Type IV pilus assembly protein PilN.
 
   
 0.551
Your Current Organism:
Nitrosomonas sp. Nm58
NCBI taxonomy Id: 200126
Other names: N. sp. Nm58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.