Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY01902.1 | SDY03360.1 | SAMN05421754_100172 | SAMN05421754_1001121 | Maltose alpha-D-glucosyltransferase/ alpha-amylase. | Alpha amylase, catalytic domain. | 0.961 |
SDY01902.1 | SDY74908.1 | SAMN05421754_100172 | SAMN05421754_102019 | Maltose alpha-D-glucosyltransferase/ alpha-amylase. | Amino acid transporter. | 0.970 |
SDY03360.1 | SDY01902.1 | SAMN05421754_1001121 | SAMN05421754_100172 | Alpha amylase, catalytic domain. | Maltose alpha-D-glucosyltransferase/ alpha-amylase. | 0.961 |
SDY03360.1 | SDY74908.1 | SAMN05421754_1001121 | SAMN05421754_102019 | Alpha amylase, catalytic domain. | Amino acid transporter. | 0.970 |
SDY43173.1 | SDY74908.1 | SAMN05421754_100964 | SAMN05421754_102019 | O-antigen ligase. | Amino acid transporter. | 0.707 |
SDY43173.1 | SDY83093.1 | SAMN05421754_100964 | SAMN05421754_102439 | O-antigen ligase. | Hypothetical protein. | 0.772 |
SDY43173.1 | SDZ01895.1 | SAMN05421754_100964 | SAMN05421754_104310 | O-antigen ligase. | Outer membrane protein (porin). | 0.769 |
SDY43173.1 | SDZ13233.1 | SAMN05421754_100964 | SAMN05421754_10683 | O-antigen ligase. | Putative copper resistance protein D. | 0.762 |
SDY74797.1 | SDY74824.1 | SAMN05421754_102015 | SAMN05421754_102016 | Allophanate hydrolase. | Urea carboxylase. | 0.999 |
SDY74797.1 | SDY74851.1 | SAMN05421754_102015 | SAMN05421754_102017 | Allophanate hydrolase. | Hypothetical protein. | 0.982 |
SDY74797.1 | SDY74879.1 | SAMN05421754_102015 | SAMN05421754_102018 | Allophanate hydrolase. | Hypothetical protein. | 0.983 |
SDY74797.1 | SDY74908.1 | SAMN05421754_102015 | SAMN05421754_102019 | Allophanate hydrolase. | Amino acid transporter. | 0.784 |
SDY74824.1 | SDY74797.1 | SAMN05421754_102016 | SAMN05421754_102015 | Urea carboxylase. | Allophanate hydrolase. | 0.999 |
SDY74824.1 | SDY74851.1 | SAMN05421754_102016 | SAMN05421754_102017 | Urea carboxylase. | Hypothetical protein. | 0.998 |
SDY74824.1 | SDY74879.1 | SAMN05421754_102016 | SAMN05421754_102018 | Urea carboxylase. | Hypothetical protein. | 0.998 |
SDY74824.1 | SDY74908.1 | SAMN05421754_102016 | SAMN05421754_102019 | Urea carboxylase. | Amino acid transporter. | 0.753 |
SDY74824.1 | SDZ13233.1 | SAMN05421754_102016 | SAMN05421754_10683 | Urea carboxylase. | Putative copper resistance protein D. | 0.468 |
SDY74851.1 | SDY74797.1 | SAMN05421754_102017 | SAMN05421754_102015 | Hypothetical protein. | Allophanate hydrolase. | 0.982 |
SDY74851.1 | SDY74824.1 | SAMN05421754_102017 | SAMN05421754_102016 | Hypothetical protein. | Urea carboxylase. | 0.998 |
SDY74851.1 | SDY74879.1 | SAMN05421754_102017 | SAMN05421754_102018 | Hypothetical protein. | Hypothetical protein. | 0.875 |
page 1 of 3