STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY82314.1Hypothetical protein. (151 aa)    
Predicted Functional Partners:
SDY82285.1
Sugar-transfer associated ATP-grasp.
      0.900
SDY82254.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
       0.773
SDY82363.1
Hypothetical protein.
       0.762
SDY82394.1
Hypothetical protein.
       0.756
SDY26833.1
PDZ domain-containing protein.
     
 0.754
SDY82223.1
Surface carbohydrate biosynthesis protein.
       0.732
SDY98934.1
Cyanophycin synthetase.
    
 0.513
SDY98953.1
Cyanophycin synthetase.
    
 0.513
SDY82160.1
N-acylneuraminate cytidylyltransferase.
       0.507
SDY90184.1
Glutamate--cysteine ligase.
    
 0.473
Your Current Organism:
Nitrosomonas sp. Nm58
NCBI taxonomy Id: 200126
Other names: N. sp. Nm58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.