STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ18620.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
SDZ18641.1
Alginate export.
 
     0.776
SDY75670.1
4-oxalocrotonate tautomerase.
  
     0.521
SDY43173.1
O-antigen ligase.
  
     0.511
SDY53457.1
Transglutaminase-like enzyme, putative cysteine protease.
  
     0.510
SDY26641.1
Protein of unknown function.
  
     0.450
SDZ18662.1
LTXXQ motif family protein.
       0.432
SDZ11546.1
ADP-ribosylglycohydrolase.
  
     0.418
SDY83093.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Nitrosomonas sp. Nm58
NCBI taxonomy Id: 200126
Other names: N. sp. Nm58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.