STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ19247.1DNA adenine methylase. (82 aa)    
Predicted Functional Partners:
SDY24137.1
Mu-like prophage protein gp36.
 
     0.702
SDY24379.1
Mu-like prophage protein gp29.
 
     0.696
SDY24193.1
Mu-like prophage major head subunit gpT.
 
     0.680
SDY24405.1
Phage uncharacterized protein (putative large terminase), C-terminal domain-containing protein.
  
     0.675
SDY24434.1
Protein of unknown function.
  
     0.672
SDY24254.1
Mu-like prophage I protein.
 
     0.647
SDY14945.1
Mu-like prophage I protein.
 
     0.625
SDY24311.1
Phage Mu protein F like protein.
 
     0.599
SDY14839.1
Phage Mu protein F like protein.
 
     0.596
SDZ19268.1
Hypothetical protein.
       0.586
Your Current Organism:
Nitrosomonas sp. Nm58
NCBI taxonomy Id: 200126
Other names: N. sp. Nm58
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