Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000721075_02027Unannotated protein. (309 aa)    
Predicted Functional Partners:
GCA_000721075_02026
Unannotated protein.
 
     0.958
GCA_000721075_02028
Unannotated protein.
 
  
 0.882
GCA_000721075_02024
Unannotated protein.
 
   
 0.846
GCA_000721075_02023
Unannotated protein.
 
     0.804
GCA_000721075_02643
Unannotated protein.
  
  
  0.763
GCA_000721075_03308
Unannotated protein.
 
  
  0.636
GCA_000721075_07437
Unannotated protein.
  
  
 
0.584
GCA_000721075_07307
Unannotated protein.
  
  
  0.542
GCA_000721075_08177
Unannotated protein.
  
 
 0.532
GCA_000721075_07745
Unannotated protein.
 
  
 0.515
Your Current Organism:
Streptosporangium amethystogenes
NCBI taxonomy Id: 2002
Other names: ATCC 33327, DSM 43179, IFO 13986, JCM 3026, KCC A-0026, NBRC 13986, NRRL B-2639, S. amethystogenes, VKM Ac-637
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