STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000721075_03316Unannotated protein. (385 aa)    
Predicted Functional Partners:
GCA_000721075_06599
Unannotated protein.
  
    0.771
GCA_000721075_08206
Unannotated protein.
  
    0.570
GCA_000721075_01943
Unannotated protein.
  
     0.523
GCA_000721075_01581
Unannotated protein.
  
     0.490
GCA_000721075_04397
Unannotated protein.
  
     0.485
GCA_000721075_01748
Unannotated protein.
  
     0.456
GCA_000721075_05003
Unannotated protein.
  
     0.439
GCA_000721075_07097
Unannotated protein.
  
     0.436
GCA_000721075_01731
Unannotated protein.
  
     0.412
Your Current Organism:
Streptosporangium amethystogenes
NCBI taxonomy Id: 2002
Other names: ATCC 33327, DSM 43179, IFO 13986, JCM 3026, KCC A-0026, NBRC 13986, NRRL B-2639, S. amethystogenes, VKM Ac-637
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.