STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000721075_04777Unannotated protein. (522 aa)    
Predicted Functional Partners:
GCA_000721075_04778
Unannotated protein.
 
     0.861
GCA_000721075_05585
Unannotated protein.
  
  
 0.829
GCA_000721075_01393
Unannotated protein.
  
    0.725
GCA_000721075_04106
Unannotated protein.
   
  
 0.694
GCA_000721075_06367
Unannotated protein.
  
    0.683
GCA_000721075_08330
Unannotated protein.
  
  
0.675
GCA_000721075_07477
Unannotated protein.
  
    0.664
GCA_000721075_00475
Unannotated protein.
   
  
 0.644
GCA_000721075_05488
Unannotated protein.
   
    0.642
GCA_000721075_01156
Unannotated protein.
   
    0.637
Your Current Organism:
Streptosporangium amethystogenes
NCBI taxonomy Id: 2002
Other names: ATCC 33327, DSM 43179, IFO 13986, JCM 3026, KCC A-0026, NBRC 13986, NRRL B-2639, S. amethystogenes, VKM Ac-637
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.