STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCANC_15667ANK_REP_REGION domain-containing protein. (621 aa)    
Predicted Functional Partners:
PCANC_06063
Uncharacterized protein.
   
 0.799
PCANC_06542
Uncharacterized protein.
   
 0.799
PCANC_18839
NAD(P)-bd_dom domain-containing protein.
    
 
 0.735
PCANC_25013
Uncharacterized protein.
    
  0.705
PCANC_28783
Uncharacterized protein.
    
  0.705
PCANC_00073
T-complex protein 1 subunit delta.
    
   0.678
PCANC_22861
Serine/threonine-protein phosphatase.
    
 0.675
PCANC_19250
Serine/threonine-protein phosphatase.
    
 0.675
PCANC_24293
Helicase C-terminal domain-containing protein.
    
 0.671
PCANC_14085
Nudix hydrolase domain-containing protein.
    
   0.669
Your Current Organism:
Puccinia coronata
NCBI taxonomy Id: 200324
Other names: P. coronata var. avenae f. sp. avenae, Puccinia coronata var. avenae f. sp. avenae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.