STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCANC_09992Ribosomal_L18e/L15P domain-containing protein. (328 aa)    
Predicted Functional Partners:
PCANC_17736
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 0.993
PCANC_04251
Uncharacterized protein.
  
 0.993
PCANC_11693
Uncharacterized protein.
  
 0.990
PCANC_16264
Uncharacterized protein.
   
 0.990
PCANC_11055
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.986
PCANC_00340
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.985
PCANC_16435
Uncharacterized protein.
  
 0.984
PCANC_24474
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.983
PCANC_06595
Ribosomal_L18_c domain-containing protein.
  
 0.983
PCANC_06815
Uncharacterized protein.
  
 0.982
Your Current Organism:
Puccinia coronata
NCBI taxonomy Id: 200324
Other names: P. coronata var. avenae f. sp. avenae, Puccinia coronata var. avenae f. sp. avenae
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