STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCANC_18872Uncharacterized protein. (600 aa)    
Predicted Functional Partners:
PCANC_07509
OBG-type G domain-containing protein.
    
   0.705
PCANC_28847
V-SNARE coiled-coil homology domain-containing protein.
     
 0.665
PCANC_15442
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.648
MDM34
Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.
    
 
 0.648
PCANC_15629
Uncharacterized protein.
    
   0.616
PCANC_22511
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.616
PCANC_09777
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.616
PCANC_01208
Uncharacterized protein.
    
   0.616
PCANC_20513
Citrate synthase; Belongs to the citrate synthase family.
    
   0.580
PCANC_07933
Citrate synthase; Belongs to the citrate synthase family.
    
   0.580
Your Current Organism:
Puccinia coronata
NCBI taxonomy Id: 200324
Other names: P. coronata var. avenae f. sp. avenae, Puccinia coronata var. avenae f. sp. avenae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.