STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCANC_04790Uncharacterized protein. (1034 aa)    
Predicted Functional Partners:
PCANC_04256
WD_REPEATS_REGION domain-containing protein.
   
 0.999
PCANC_14376
WD_REPEATS_REGION domain-containing protein.
   
 0.999
PCANC_02426
Uncharacterized protein.
   
 0.999
PCANC_10423
Uncharacterized protein.
   
 0.998
PCANC_16478
WD_REPEATS_REGION domain-containing protein.
   
 0.998
PCANC_10416
U3 small nucleolar RNA-associated protein 22.
   
 0.998
PCANC_13579
BP28CT domain-containing protein.
   
 0.998
PCANC_13872
WD_REPEATS_REGION domain-containing protein.
   
 0.998
PCANC_06285
U3 small nucleolar RNA-associated protein 22.
   
 0.998
PCANC_25383
WD_REPEATS_REGION domain-containing protein.
   
 0.998
Your Current Organism:
Puccinia coronata
NCBI taxonomy Id: 200324
Other names: P. coronata var. avenae f. sp. avenae, Puccinia coronata var. avenae f. sp. avenae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.