A0A452ZUT9 protein (Aegilops tauschii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A452ZUT9

Uncharacterized protein. (78 aa)

Predicted Functional Partners:

A0A453PDI5

0.812

A0A453LHP2

0.793

A0A452ZFR4

0.776

A0A453FQJ1

0.776

A0A453BG16

0.759

A0A453G8A3

0.759

A0A453Q2D5

0.759

A0A453Q2X9

0.759

A0A453QY76

0.759

A0A453RA93

0.750

Your Current Organism:

Aegilops tauschii

NCBI taxonomy Id: 200361
Other names: A. tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata (Eig) Tzvelev

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A452ZFR4	A0A452ZUT9	RING-type domain-containing protein.	Uncharacterized protein.	0.776
A0A452ZFR4	A0A453PDI5	RING-type domain-containing protein.	Uncharacterized protein.	0.820
A0A452ZFR4	A0A453QY76	RING-type domain-containing protein.	Uncharacterized protein.	0.401
A0A452ZUT9	A0A452ZFR4	Uncharacterized protein.	RING-type domain-containing protein.	0.776
A0A452ZUT9	A0A453BG16	Uncharacterized protein.	Uncharacterized protein.	0.759
A0A452ZUT9	A0A453FQJ1	Uncharacterized protein.	RING-type domain-containing protein.	0.776
A0A452ZUT9	A0A453G8A3	Uncharacterized protein.	Uncharacterized protein.	0.759
A0A452ZUT9	A0A453LHP2	Uncharacterized protein.	Uncharacterized protein.	0.793
A0A452ZUT9	A0A453PDI5	Uncharacterized protein.	Uncharacterized protein.	0.812
A0A452ZUT9	A0A453Q2D5	Uncharacterized protein.	Myb-like domain-containing protein.	0.759
A0A452ZUT9	A0A453Q2X9	Uncharacterized protein.	Myb-like domain-containing protein.	0.759
A0A452ZUT9	A0A453QY76	Uncharacterized protein.	Uncharacterized protein.	0.759
A0A452ZUT9	A0A453RA93	Uncharacterized protein.	Uncharacterized protein.	0.750
A0A453BG16	A0A452ZUT9	Uncharacterized protein.	Uncharacterized protein.	0.759
A0A453BG16	A0A453PDI5	Uncharacterized protein.	Uncharacterized protein.	0.955
A0A453BG16	A0A453RA93	Uncharacterized protein.	Uncharacterized protein.	0.898
A0A453FQJ1	A0A452ZUT9	RING-type domain-containing protein.	Uncharacterized protein.	0.776
A0A453FQJ1	A0A453PDI5	RING-type domain-containing protein.	Uncharacterized protein.	0.820
A0A453FQJ1	A0A453QY76	RING-type domain-containing protein.	Uncharacterized protein.	0.401
A0A453G8A3	A0A452ZUT9	Uncharacterized protein.	Uncharacterized protein.	0.759