STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A453CRC3F-box domain-containing protein. (445 aa)    
Predicted Functional Partners:
A0A453PMY9
TPR_REGION domain-containing protein.
   
 0.952
A0A452Y361
Ubiquitin-like domain-containing protein.
   
 0.951
A0A453LRZ1
Histone H2A; Belongs to the histone H2A family.
   
 0.950
A0A453RJY1
Histone H2A; Belongs to the histone H2A family.
   
 0.950
A0A453J0E9
Uncharacterized protein.
    
 0.944
A0A453J170
Uncharacterized protein.
    
 0.944
A0A453NUU0
Uncharacterized protein.
   
 0.944
A0A453DNZ4
Uncharacterized protein.
    
 0.943
A0A453RA93
Uncharacterized protein.
    
  0.942
A0A453BQ53
Uncharacterized protein.
    
 0.932
Your Current Organism:
Aegilops tauschii
NCBI taxonomy Id: 200361
Other names: A. tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata (Eig) Tzvelev
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