STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A453CRV5Uncharacterized protein. (449 aa)    
Predicted Functional Partners:
A0A453F2V1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 0.957
A0A453I5E9
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 0.955
A0A453JNX2
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.947
A0A453CA99
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.944
A0A453MAY7
MTS domain-containing protein.
  
 
 0.924
A0A453P090
Uncharacterized protein.
  
  
 
0.859
A0A453IKN5
SE domain-containing protein.
  
  
 0.831
A0A453Q123
Nicotinamide-nucleotide adenylyltransferase.
  
    0.814
A0A452XJ41
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
  
 0.790
A0A452YSW1
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
  
 0.790
Your Current Organism:
Aegilops tauschii
NCBI taxonomy Id: 200361
Other names: A. tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata (Eig) Tzvelev
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