A0A453DHG5 protein (Aegilops tauschii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A453DHG5

GH10 domain-containing protein. (568 aa)

Predicted Functional Partners:

A0A453G8Y8

0.942

A0A453KSF6

0.942

A0A453ICL1

0.940

A0A453E050

0.933

A0A453HLR0

0.927

A0A453AQ52

0.900

A0A453MW05

0.883

A0A453BAA1

0.821

A0A453RAU9

0.738

A0A453KG61

0.735

Your Current Organism:

Aegilops tauschii

NCBI taxonomy Id: 200361
Other names: A. tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata (Eig) Tzvelev

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A453AQ52	A0A453BAA1	Uncharacterized protein.	Uncharacterized protein.	0.811
A0A453AQ52	A0A453DHG5	Uncharacterized protein.	GH10 domain-containing protein.	0.900
A0A453AQ52	A0A453E050	Uncharacterized protein.	Uncharacterized protein.	0.956
A0A453AQ52	A0A453G8Y8	Uncharacterized protein.	Beta-Casp domain-containing protein.	0.963
A0A453AQ52	A0A453HLR0	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A453AQ52	A0A453ICL1	Uncharacterized protein.	Uncharacterized protein.	0.956
A0A453AQ52	A0A453KG61	Uncharacterized protein.	RPOLD domain-containing protein.	0.998
A0A453AQ52	A0A453KSF6	Uncharacterized protein.	Uncharacterized protein.	0.959
A0A453AQ52	A0A453MW05	Uncharacterized protein.	RPOL4c domain-containing protein.	0.999
A0A453AQ52	A0A453RAU9	Uncharacterized protein.	Uncharacterized protein.	0.925
A0A453BAA1	A0A453AQ52	Uncharacterized protein.	Uncharacterized protein.	0.811
A0A453BAA1	A0A453DHG5	Uncharacterized protein.	GH10 domain-containing protein.	0.821
A0A453BAA1	A0A453E050	Uncharacterized protein.	Uncharacterized protein.	0.824
A0A453BAA1	A0A453G8Y8	Uncharacterized protein.	Beta-Casp domain-containing protein.	0.871
A0A453BAA1	A0A453HLR0	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A453BAA1	A0A453ICL1	Uncharacterized protein.	Uncharacterized protein.	0.780
A0A453BAA1	A0A453KSF6	Uncharacterized protein.	Uncharacterized protein.	0.879
A0A453DHG5	A0A453AQ52	GH10 domain-containing protein.	Uncharacterized protein.	0.900
A0A453DHG5	A0A453BAA1	GH10 domain-containing protein.	Uncharacterized protein.	0.821
A0A453DHG5	A0A453E050	GH10 domain-containing protein.	Uncharacterized protein.	0.933