STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A453H4K3Uncharacterized protein. (105 aa)    
Predicted Functional Partners:
A0A453HID0
Uncharacterized protein.
    
 0.883
A0A453JB99
Uncharacterized protein.
    
  0.817
A0A453JBN6
ERCC4 domain-containing protein.
    
  0.817
A0A453D3V8
Uncharacterized protein.
    
 0.710
A0A453D3W4
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
    
 0.710
A0A453E603
SANT domain-containing protein.
    
 0.683
A0A453JEV0
DIRP domain-containing protein.
    
 0.683
A0A453PHS4
Uncharacterized protein.
    
  0.681
A0A453P513
Uncharacterized protein.
    
 0.676
A0A453Q6U6
RPA_C domain-containing protein.
    
 0.676
Your Current Organism:
Aegilops tauschii
NCBI taxonomy Id: 200361
Other names: A. tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata (Eig) Tzvelev
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