STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A453J539DUF2428 domain-containing protein. (2145 aa)    
Predicted Functional Partners:
A0A453SNC1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
 
 0.982
A0A452ZR15
Uncharacterized protein.
   
 
 0.893
A0A452ZR31
Uncharacterized protein.
   
 
 0.893
A0A452ZY47
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.893
A0A453MA37
FtsJ domain-containing protein.
   
 
 0.893
A0A453P808
FtsJ domain-containing protein.
   
 
 0.893
A0A453SRI8
Uncharacterized protein.
   
 
 0.893
A0A453IRJ0
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
  
 0.814
A0A453QX46
Uncharacterized protein.
  
    0.806
A0A453JD50
Uncharacterized protein.
  
 
 0.805
Your Current Organism:
Aegilops tauschii
NCBI taxonomy Id: 200361
Other names: A. tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata (Eig) Tzvelev
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