Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A453LFN2Uncharacterized protein. (712 aa)    
Predicted Functional Partners:
A0A453C7E6
Uncharacterized protein.
   
  0.818
A0A453NZP6
Uncharacterized protein.
   
  0.818
A0A453NT83
Uncharacterized protein.
   
 0.774
A0A452Z186
Uncharacterized protein.
    
  0.758
A0A453N7J1
Protein kinase domain-containing protein.
  
 
 0.739
A0A453A349
Tyrosine-protein phosphatase domain-containing protein.
    
  0.674
A0A453J8E1
TYR_PHOSPHATASE_2 domain-containing protein.
    
  0.674
A0A453P3X9
Uncharacterized protein.
   
  0.651
A0A452Y361
Ubiquitin-like domain-containing protein.
    
  0.649
A0A453B2F4
TRAF-type domain-containing protein.
    
  0.635
Your Current Organism:
Aegilops tauschii
NCBI taxonomy Id: 200361
Other names: A. tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata (Eig) Tzvelev
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