A0A453R303 protein (Aegilops tauschii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A453R303

Uncharacterized protein. (51 aa)

Predicted Functional Partners:

A0A453DLC4

0.992

A0A453QDS2

0.992

A0A452XDF0

0.991

A0A453EFN3

0.991

A0A453JK87

0.991

A0A453L3J6

0.991

A0A453LVL5

0.991

A0A453S8M6

0.991

A0A453T2P7

0.991

A0A453T732

0.991

Your Current Organism:

Aegilops tauschii

NCBI taxonomy Id: 200361
Other names: A. tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata (Eig) Tzvelev

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A452XDF0	A0A453DLC4	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein.	0.992
A0A452XDF0	A0A453EFN3	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein.	0.978
A0A452XDF0	A0A453JK87	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein.	0.974
A0A452XDF0	A0A453L3J6	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	DUF1664 domain-containing protein.	0.994
A0A452XDF0	A0A453LVL5	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.974
A0A452XDF0	A0A453QDS2	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.860
A0A452XDF0	A0A453R303	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein.	0.991
A0A452XDF0	A0A453S8M6	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.994
A0A452XDF0	A0A453T2P7	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein.	0.978
A0A452XDF0	A0A453T732	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.993
A0A453DLC4	A0A452XDF0	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.992
A0A453DLC4	A0A453EFN3	Uncharacterized protein.	Uncharacterized protein.	0.975
A0A453DLC4	A0A453JK87	Uncharacterized protein.	Uncharacterized protein.	0.977
A0A453DLC4	A0A453L3J6	Uncharacterized protein.	DUF1664 domain-containing protein.	0.993
A0A453DLC4	A0A453LVL5	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.977
A0A453DLC4	A0A453QDS2	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.992
A0A453DLC4	A0A453R303	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A453DLC4	A0A453S8M6	Uncharacterized protein.	S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.993
A0A453DLC4	A0A453T2P7	Uncharacterized protein.	Uncharacterized protein.	0.975
A0A453DLC4	A0A453T732	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.995