STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A453SIF1RING-type domain-containing protein. (337 aa)    
Predicted Functional Partners:
A0A452Y361
Ubiquitin-like domain-containing protein.
    
 0.908
A0A453GDP2
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.757
A0A453J6K8
Uncharacterized protein.
    
  0.757
A0A452XSY2
HECT domain-containing protein.
    
 0.690
A0A452ZAJ4
HECT domain-containing protein.
    
 0.690
A0A453AFU8
HECT domain-containing protein.
     
 0.678
A0A453MNU6
HECT domain-containing protein.
     
 0.678
A0A453MNW8
HECT domain-containing protein.
     
 0.678
A0A453EQH9
E2_bind domain-containing protein.
   
 
  0.628
A0A453SLR8
MINDY_DUB domain-containing protein.
    
  0.623
Your Current Organism:
Aegilops tauschii
NCBI taxonomy Id: 200361
Other names: A. tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata (Eig) Tzvelev
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