STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A453SQN5DUF1618 domain-containing protein. (588 aa)    
Predicted Functional Partners:
A0A453EZR9
LRRNT_2 domain-containing protein.
    
 0.942
A0A453D3Q4
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.936
A0A452XYF2
Serine/threonine-protein phosphatase.
   
 0.929
A0A453JKS5
Serine/threonine-protein phosphatase.
   
 0.929
A0A453PDI5
Uncharacterized protein.
    
 0.911
A0A453PAX7
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.908
A0A453PH65
Rhodanese domain-containing protein.
    
  0.908
A0A453K2E8
Uncharacterized protein.
    
  0.885
A0A453PTM1
Uncharacterized protein.
   
 0.884
A0A453A0N6
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
  0.883
Your Current Organism:
Aegilops tauschii
NCBI taxonomy Id: 200361
Other names: A. tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata (Eig) Tzvelev
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