STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF46509.1Transcriptional regulator, PaaX family. (304 aa)    
Predicted Functional Partners:
SDF46582.1
2-hydroxyglutaryl-CoA dehydratase, D-component.
 
     0.697
SDF46566.1
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB.
 
     0.683
SDF63592.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
   
 0.511
SDF46420.1
Polar amino acid transport system substrate-binding protein.
  
     0.490
SDH31909.1
Hypothetical protein.
 
     0.481
SDF46481.1
Poly-gamma-glutamate synthesis protein (capsule biosynthesis protein).
  
     0.477
SDF63523.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
  
 0.476
SDF46520.1
Transcriptional regulator, PaaX family.
 
    
0.465
SDF63558.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
  
 0.443
SDH32073.1
Cellulose binding domain-containing protein.
  
     0.432
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.