STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF46756.1Non-ribosomal peptide synthetase component E (peptide arylation enzyme). (554 aa)    
Predicted Functional Partners:
SDH33535.1
Amino acid adenylation domain-containing protein.
 
0.999
SDH31195.1
Amino acid adenylation domain-containing protein.
 
0.999
SDH56092.1
Amino acid adenylation domain-containing protein.
 0.999
SDH48938.1
Phosphopantetheine attachment site.
  
 0.998
SDG06443.1
Amino acid adenylation domain-containing protein.
 
0.995
SDG06453.1
Amino acid adenylation domain-containing protein.
 
 
0.995
SDH56056.1
Amino acid adenylation domain-containing protein.
 
 
0.995
SDF43195.1
Amino acid adenylation domain-containing protein.
 
 0.993
SDH31163.1
Amino acid adenylation domain-containing protein.
 
 0.989
SDH32696.1
Amino acid adenylation domain-containing protein.
 
0.988
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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