Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF46667.1 | SDF46696.1 | SAMN05216553_101769 | SAMN05216553_101770 | Hypothetical protein. | Hypothetical protein. | 0.833 |
SDF46667.1 | SDF46717.1 | SAMN05216553_101769 | SAMN05216553_101771 | Hypothetical protein. | Catechol 2,3-dioxygenase. | 0.954 |
SDF46667.1 | SDF46756.1 | SAMN05216553_101769 | SAMN05216553_101773 | Hypothetical protein. | Non-ribosomal peptide synthetase component E (peptide arylation enzyme). | 0.603 |
SDF46667.1 | SDF46780.1 | SAMN05216553_101769 | SAMN05216553_101774 | Hypothetical protein. | Acyl dehydratase. | 0.481 |
SDF46667.1 | SDF46797.1 | SAMN05216553_101769 | SAMN05216553_101775 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.749 |
SDF46667.1 | maiA | SAMN05216553_101769 | SAMN05216553_101772 | Hypothetical protein. | Maleate isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. | 0.932 |
SDF46696.1 | SDF46667.1 | SAMN05216553_101770 | SAMN05216553_101769 | Hypothetical protein. | Hypothetical protein. | 0.833 |
SDF46696.1 | SDF46717.1 | SAMN05216553_101770 | SAMN05216553_101771 | Hypothetical protein. | Catechol 2,3-dioxygenase. | 0.816 |
SDF46696.1 | SDF46756.1 | SAMN05216553_101770 | SAMN05216553_101773 | Hypothetical protein. | Non-ribosomal peptide synthetase component E (peptide arylation enzyme). | 0.493 |
SDF46696.1 | SDF46780.1 | SAMN05216553_101770 | SAMN05216553_101774 | Hypothetical protein. | Acyl dehydratase. | 0.481 |
SDF46696.1 | SDF46797.1 | SAMN05216553_101770 | SAMN05216553_101775 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.472 |
SDF46696.1 | maiA | SAMN05216553_101770 | SAMN05216553_101772 | Hypothetical protein. | Maleate isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. | 0.768 |
SDF46717.1 | SDF46667.1 | SAMN05216553_101771 | SAMN05216553_101769 | Catechol 2,3-dioxygenase. | Hypothetical protein. | 0.954 |
SDF46717.1 | SDF46696.1 | SAMN05216553_101771 | SAMN05216553_101770 | Catechol 2,3-dioxygenase. | Hypothetical protein. | 0.816 |
SDF46717.1 | SDF46756.1 | SAMN05216553_101771 | SAMN05216553_101773 | Catechol 2,3-dioxygenase. | Non-ribosomal peptide synthetase component E (peptide arylation enzyme). | 0.570 |
SDF46717.1 | SDF46780.1 | SAMN05216553_101771 | SAMN05216553_101774 | Catechol 2,3-dioxygenase. | Acyl dehydratase. | 0.558 |
SDF46717.1 | SDF46797.1 | SAMN05216553_101771 | SAMN05216553_101775 | Catechol 2,3-dioxygenase. | Transcriptional regulator, TetR family. | 0.741 |
SDF46717.1 | maiA | SAMN05216553_101771 | SAMN05216553_101772 | Catechol 2,3-dioxygenase. | Maleate isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. | 0.914 |
SDF46756.1 | SDF46667.1 | SAMN05216553_101773 | SAMN05216553_101769 | Non-ribosomal peptide synthetase component E (peptide arylation enzyme). | Hypothetical protein. | 0.603 |
SDF46756.1 | SDF46696.1 | SAMN05216553_101773 | SAMN05216553_101770 | Non-ribosomal peptide synthetase component E (peptide arylation enzyme). | Hypothetical protein. | 0.493 |
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