Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF58646.1 | SDF58677.1 | SAMN05216553_102185 | SAMN05216553_102186 | Glycerophosphoryl diester phosphodiesterase. | TRAP transporter, 4TM/12TM fusion protein. | 0.507 |
SDF58646.1 | SDF58703.1 | SAMN05216553_102185 | SAMN05216553_102187 | Glycerophosphoryl diester phosphodiesterase. | Hypothetical protein. | 0.496 |
SDF58646.1 | SDF58770.1 | SAMN05216553_102185 | SAMN05216553_102189 | Glycerophosphoryl diester phosphodiesterase. | ADP-ribosylglycohydrolase. | 0.457 |
SDF58646.1 | purD | SAMN05216553_102185 | SAMN05216553_102188 | Glycerophosphoryl diester phosphodiesterase. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.521 |
SDF58677.1 | SDF58646.1 | SAMN05216553_102186 | SAMN05216553_102185 | TRAP transporter, 4TM/12TM fusion protein. | Glycerophosphoryl diester phosphodiesterase. | 0.507 |
SDF58677.1 | SDF58703.1 | SAMN05216553_102186 | SAMN05216553_102187 | TRAP transporter, 4TM/12TM fusion protein. | Hypothetical protein. | 0.990 |
SDF58677.1 | SDF58770.1 | SAMN05216553_102186 | SAMN05216553_102189 | TRAP transporter, 4TM/12TM fusion protein. | ADP-ribosylglycohydrolase. | 0.727 |
SDF58677.1 | purD | SAMN05216553_102186 | SAMN05216553_102188 | TRAP transporter, 4TM/12TM fusion protein. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.750 |
SDF58703.1 | SDF58646.1 | SAMN05216553_102187 | SAMN05216553_102185 | Hypothetical protein. | Glycerophosphoryl diester phosphodiesterase. | 0.496 |
SDF58703.1 | SDF58677.1 | SAMN05216553_102187 | SAMN05216553_102186 | Hypothetical protein. | TRAP transporter, 4TM/12TM fusion protein. | 0.990 |
SDF58703.1 | SDF58770.1 | SAMN05216553_102187 | SAMN05216553_102189 | Hypothetical protein. | ADP-ribosylglycohydrolase. | 0.727 |
SDF58703.1 | purD | SAMN05216553_102187 | SAMN05216553_102188 | Hypothetical protein. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.744 |
SDF58770.1 | SDF58646.1 | SAMN05216553_102189 | SAMN05216553_102185 | ADP-ribosylglycohydrolase. | Glycerophosphoryl diester phosphodiesterase. | 0.457 |
SDF58770.1 | SDF58677.1 | SAMN05216553_102189 | SAMN05216553_102186 | ADP-ribosylglycohydrolase. | TRAP transporter, 4TM/12TM fusion protein. | 0.727 |
SDF58770.1 | SDF58703.1 | SAMN05216553_102189 | SAMN05216553_102187 | ADP-ribosylglycohydrolase. | Hypothetical protein. | 0.727 |
SDF58770.1 | SDF80564.1 | SAMN05216553_102189 | SAMN05216553_103372 | ADP-ribosylglycohydrolase. | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | 0.548 |
SDF58770.1 | SDG27121.1 | SAMN05216553_102189 | SAMN05216553_106505 | ADP-ribosylglycohydrolase. | Hypothetical protein. | 0.523 |
SDF58770.1 | SDG35154.1 | SAMN05216553_102189 | SAMN05216553_107286 | ADP-ribosylglycohydrolase. | Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family. | 0.792 |
SDF58770.1 | purD | SAMN05216553_102189 | SAMN05216553_102188 | ADP-ribosylglycohydrolase. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.773 |
SDF80564.1 | SDF58770.1 | SAMN05216553_103372 | SAMN05216553_102189 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | ADP-ribosylglycohydrolase. | 0.548 |
page 1 of 2