STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF55755.1solute:Na+ symporter, SSS family. (544 aa)    
Predicted Functional Partners:
SDF55775.1
Protein of unknown function.
 
     0.956
SDH20036.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
 
 0.745
SDF62282.1
L-proline dehydrogenase.
  
  
 0.657
SDG20311.1
L-proline dehydrogenase.
  
  
 0.657
SDF55705.1
Septum formation.
       0.591
SDF55727.1
Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase).
       0.578
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.576
SDH04808.1
Hypothetical protein.
    
 0.546
SDH04830.1
Signal transduction histidine kinase.
    
 0.546
SDF55796.1
Transcriptional regulator, HxlR family.
       0.541
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.