STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF81995.1Histidine kinase-like ATPase domain-containing protein. (132 aa)    
Predicted Functional Partners:
SDF74718.1
Anti-anti-sigma factor.
 
 0.936
SDG71520.1
Anti-anti-sigma factor.
  
 0.927
SDF73520.1
PAS domain S-box-containing protein.
  
 0.735
SDF40245.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.666
SDH20036.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
  
 0.660
SDF81974.1
Hypothetical protein.
 
    
0.651
SDF74741.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.640
SDF74760.1
Response regulator receiver domain-containing protein.
  
 0.638
SDF96261.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.626
SDF93398.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.610
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.