Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF83066.1 | SDG26013.1 | SAMN05216553_103481 | SAMN05216553_106443 | Hypothetical protein. | NYN domain-containing protein. | 0.744 |
SDF83066.1 | SDG32289.1 | SAMN05216553_103481 | SAMN05216553_107122 | Hypothetical protein. | MerR HTH family regulatory protein. | 0.695 |
SDF83066.1 | SDG35519.1 | SAMN05216553_103481 | SAMN05216553_107304 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.563 |
SDF83066.1 | SDG70288.1 | SAMN05216553_103481 | SAMN05216553_110325 | Hypothetical protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.748 |
SDF83066.1 | SDG80436.1 | SAMN05216553_103481 | SAMN05216553_111331 | Hypothetical protein. | Hypothetical protein. | 0.760 |
SDF83066.1 | SDG94459.1 | SAMN05216553_103481 | SAMN05216553_113239 | Hypothetical protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.416 |
SDG26013.1 | SDF83066.1 | SAMN05216553_106443 | SAMN05216553_103481 | NYN domain-containing protein. | Hypothetical protein. | 0.744 |
SDG26013.1 | SDG32289.1 | SAMN05216553_106443 | SAMN05216553_107122 | NYN domain-containing protein. | MerR HTH family regulatory protein. | 0.640 |
SDG26013.1 | SDG35519.1 | SAMN05216553_106443 | SAMN05216553_107304 | NYN domain-containing protein. | Ribosomal protein S18 acetylase RimI. | 0.566 |
SDG26013.1 | SDG70288.1 | SAMN05216553_106443 | SAMN05216553_110325 | NYN domain-containing protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.752 |
SDG26013.1 | SDG80436.1 | SAMN05216553_106443 | SAMN05216553_111331 | NYN domain-containing protein. | Hypothetical protein. | 0.734 |
SDG32289.1 | SDF83066.1 | SAMN05216553_107122 | SAMN05216553_103481 | MerR HTH family regulatory protein. | Hypothetical protein. | 0.695 |
SDG32289.1 | SDG26013.1 | SAMN05216553_107122 | SAMN05216553_106443 | MerR HTH family regulatory protein. | NYN domain-containing protein. | 0.640 |
SDG32289.1 | SDG32296.1 | SAMN05216553_107122 | SAMN05216553_107123 | MerR HTH family regulatory protein. | Bacteriocin biosynthesis cyclodehydratase domain-containing protein. | 0.788 |
SDG32289.1 | SDG32337.1 | SAMN05216553_107122 | SAMN05216553_107125 | MerR HTH family regulatory protein. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.696 |
SDG32289.1 | SDG32351.1 | SAMN05216553_107122 | SAMN05216553_107126 | MerR HTH family regulatory protein. | Nitroreductase. | 0.691 |
SDG32289.1 | SDG35519.1 | SAMN05216553_107122 | SAMN05216553_107304 | MerR HTH family regulatory protein. | Ribosomal protein S18 acetylase RimI. | 0.603 |
SDG32289.1 | SDG56197.1 | SAMN05216553_107122 | SAMN05216553_10985 | MerR HTH family regulatory protein. | acetyl-CoA carboxylase carboxyl transferase subunit beta. | 0.772 |
SDG32289.1 | SDG70288.1 | SAMN05216553_107122 | SAMN05216553_110325 | MerR HTH family regulatory protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.640 |
SDG32289.1 | SDG80436.1 | SAMN05216553_107122 | SAMN05216553_111331 | MerR HTH family regulatory protein. | Hypothetical protein. | 0.691 |
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