STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG43087.1P-hydroxybenzoate 3-monooxygenase. (391 aa)    
Predicted Functional Partners:
SDF79946.1
Protocatechuate 3,4-dioxygenase beta subunit.
 
 
 0.952
SDF79930.1
Protocatechuate 3,4-dioxygenase alpha subunit.
 
 
 0.951
SDF79868.1
4-carboxymuconolactone decarboxylase/3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
 
 
 0.810
SDG05252.1
Hypothetical protein; Belongs to the cytochrome P450 family.
   
  0.735
SDG51324.1
Cytochrome P450.
   
  0.735
SDF79894.1
3-oxoadipate enol-lactonase/3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
  
 
  0.715
SDG55494.1
Hydroxyquinol 1,2-dioxygenase.
  
  
 0.700
SDF79905.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
     0.693
SDF75414.1
Hypothetical protein.
 
    0.670
SDG48667.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
     0.668
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.