STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG55134.1Hypothetical protein. (5759 aa)    
Predicted Functional Partners:
SDG55066.1
PPE family protein.
 
     0.853
SDG55119.1
Hypothetical protein.
 
     0.851
SDG55098.1
YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
 
    0.782
SDG10043.1
Hypothetical protein.
  
     0.772
SDF61517.1
Hypothetical protein.
  
     0.756
SDF64191.1
Hypothetical protein.
 
     0.742
SDG11146.1
Hypothetical protein.
  
     0.741
SDF38750.1
Hypothetical protein.
  
     0.735
SDG55085.1
EspG family protein.
 
     0.734
SDG92744.1
Hypothetical protein.
  
     0.729
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.