STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG70752.1Transcriptional regulator, IclR family. (277 aa)    
Predicted Functional Partners:
SDG05136.1
Transcriptional regulator, IclR family.
  
     0.773
SDG85692.1
Transcriptional regulator, IclR family.
  
     0.772
SDG54901.1
Transcriptional regulator, IclR family.
  
     0.764
SDF36814.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
  0.749
SDH11726.1
Transcriptional regulator.
  
     0.745
SDH46527.1
Transcriptional regulator, IclR family.
  
     0.740
SDG70766.1
Transcriptional regulator, TetR family.
 
    0.647
SDG70731.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
       0.620
SDH44426.1
DNA-binding transcriptional regulator, IclR family.
  
     0.569
SDF60263.1
Sensor histidine kinase inhibitor, KipI family.
  
    0.557
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.