STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG70833.1DNA-binding transcriptional regulator, GntR family. (228 aa)    
Predicted Functional Partners:
SDG86742.1
DNA-binding transcriptional regulator, GntR family.
  
     0.766
SDF74444.1
DNA-binding transcriptional regulator, GntR family.
  
     0.748
SDF34659.1
DNA-binding transcriptional regulator, GntR family.
  
     0.734
SDG64801.1
DNA-binding transcriptional regulator, GntR family.
  
     0.729
SDG55803.1
DNA-binding transcriptional regulator, GntR family.
  
     0.720
SDG23911.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.677
SDG70857.1
3-oxoacyl-[acyl-carrier protein] reductase/hypothetical protein.
 
     0.646
SDF41033.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.617
SDG98576.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
  
 0.564
SDG70785.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
       0.557
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.