Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF73520.1 | SDF74718.1 | SAMN05216553_10324 | SAMN05216553_10378 | PAS domain S-box-containing protein. | Anti-anti-sigma factor. | 0.999 |
SDF73520.1 | SDG65167.1 | SAMN05216553_10324 | SAMN05216553_11058 | PAS domain S-box-containing protein. | DNA-binding transcriptional activator of the SARP family. | 0.692 |
SDF73520.1 | SDG71520.1 | SAMN05216553_10324 | SAMN05216553_110398 | PAS domain S-box-containing protein. | Anti-anti-sigma factor. | 0.999 |
SDF73520.1 | SDH04808.1 | SAMN05216553_10324 | SAMN05216553_11534 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.999 |
SDF73520.1 | SDH04830.1 | SAMN05216553_10324 | SAMN05216553_11535 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDF73520.1 | SDH20036.1 | SAMN05216553_10324 | SAMN05216553_117179 | PAS domain S-box-containing protein. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.999 |
SDF74718.1 | SDF73520.1 | SAMN05216553_10378 | SAMN05216553_10324 | Anti-anti-sigma factor. | PAS domain S-box-containing protein. | 0.999 |
SDF74718.1 | SDG65167.1 | SAMN05216553_10378 | SAMN05216553_11058 | Anti-anti-sigma factor. | DNA-binding transcriptional activator of the SARP family. | 0.684 |
SDF74718.1 | SDG71520.1 | SAMN05216553_10378 | SAMN05216553_110398 | Anti-anti-sigma factor. | Anti-anti-sigma factor. | 0.999 |
SDF74718.1 | SDH04808.1 | SAMN05216553_10378 | SAMN05216553_11534 | Anti-anti-sigma factor. | Hypothetical protein. | 0.999 |
SDF74718.1 | SDH04830.1 | SAMN05216553_10378 | SAMN05216553_11535 | Anti-anti-sigma factor. | Signal transduction histidine kinase. | 0.999 |
SDF74718.1 | SDH20036.1 | SAMN05216553_10378 | SAMN05216553_117179 | Anti-anti-sigma factor. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.999 |
SDG09660.1 | SDG45653.1 | SAMN05216553_105313 | SAMN05216553_108160 | Helix-turn-helix domain-containing protein. | Nicotinamide-nucleotide adenylyltransferase, NadR type. | 0.803 |
SDG09660.1 | SDG65167.1 | SAMN05216553_105313 | SAMN05216553_11058 | Helix-turn-helix domain-containing protein. | DNA-binding transcriptional activator of the SARP family. | 0.754 |
SDG09660.1 | SDH04808.1 | SAMN05216553_105313 | SAMN05216553_11534 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.823 |
SDG09660.1 | SDH04830.1 | SAMN05216553_105313 | SAMN05216553_11535 | Helix-turn-helix domain-containing protein. | Signal transduction histidine kinase. | 0.823 |
SDG09660.1 | SDH20036.1 | SAMN05216553_105313 | SAMN05216553_117179 | Helix-turn-helix domain-containing protein. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.616 |
SDG31572.1 | SDG65167.1 | SAMN05216553_10782 | SAMN05216553_11058 | WD40 repeat. | DNA-binding transcriptional activator of the SARP family. | 0.954 |
SDG31572.1 | SDH04808.1 | SAMN05216553_10782 | SAMN05216553_11534 | WD40 repeat. | Hypothetical protein. | 0.552 |
SDG31572.1 | SDH04830.1 | SAMN05216553_10782 | SAMN05216553_11535 | WD40 repeat. | Signal transduction histidine kinase. | 0.552 |
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