Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG33448.1 | SDG47233.1 | SAMN05216553_107195 | SAMN05216553_108228 | Magnesium chelatase subunit D. | Cobaltochelatase CobN. | 0.992 |
SDG33448.1 | SDG55751.1 | SAMN05216553_107195 | SAMN05216553_10960 | Magnesium chelatase subunit D. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.695 |
SDG33448.1 | SDG77669.1 | SAMN05216553_107195 | SAMN05216553_111185 | Magnesium chelatase subunit D. | 3' terminal RNA ribose 2'-O-methyltransferase Hen1. | 0.718 |
SDG33448.1 | SDG83751.1 | SAMN05216553_107195 | SAMN05216553_11221 | Magnesium chelatase subunit D. | Phosphopantetheine attachment site. | 0.574 |
SDG33448.1 | SDG85679.1 | SAMN05216553_107195 | SAMN05216553_112122 | Magnesium chelatase subunit D. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.614 |
SDG47233.1 | SDG33448.1 | SAMN05216553_108228 | SAMN05216553_107195 | Cobaltochelatase CobN. | Magnesium chelatase subunit D. | 0.992 |
SDG47233.1 | SDG77669.1 | SAMN05216553_108228 | SAMN05216553_111185 | Cobaltochelatase CobN. | 3' terminal RNA ribose 2'-O-methyltransferase Hen1. | 0.487 |
SDG55751.1 | SDG33448.1 | SAMN05216553_10960 | SAMN05216553_107195 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Magnesium chelatase subunit D. | 0.695 |
SDG55751.1 | SDG77669.1 | SAMN05216553_10960 | SAMN05216553_111185 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 3' terminal RNA ribose 2'-O-methyltransferase Hen1. | 0.587 |
SDG55751.1 | SDG83751.1 | SAMN05216553_10960 | SAMN05216553_11221 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Phosphopantetheine attachment site. | 0.957 |
SDG55751.1 | SDG85679.1 | SAMN05216553_10960 | SAMN05216553_112122 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.998 |
SDG55751.1 | gcvP | SAMN05216553_10960 | SAMN05216553_108115 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
SDG77654.1 | SDG77669.1 | SAMN05216553_111184 | SAMN05216553_111185 | Hypothetical protein. | 3' terminal RNA ribose 2'-O-methyltransferase Hen1. | 0.587 |
SDG77654.1 | SDG77689.1 | SAMN05216553_111184 | SAMN05216553_111186 | Hypothetical protein. | Polynucleotide kinase-phosphatase. | 0.580 |
SDG77669.1 | SDG33448.1 | SAMN05216553_111185 | SAMN05216553_107195 | 3' terminal RNA ribose 2'-O-methyltransferase Hen1. | Magnesium chelatase subunit D. | 0.718 |
SDG77669.1 | SDG47233.1 | SAMN05216553_111185 | SAMN05216553_108228 | 3' terminal RNA ribose 2'-O-methyltransferase Hen1. | Cobaltochelatase CobN. | 0.487 |
SDG77669.1 | SDG55751.1 | SAMN05216553_111185 | SAMN05216553_10960 | 3' terminal RNA ribose 2'-O-methyltransferase Hen1. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.587 |
SDG77669.1 | SDG77654.1 | SAMN05216553_111185 | SAMN05216553_111184 | 3' terminal RNA ribose 2'-O-methyltransferase Hen1. | Hypothetical protein. | 0.587 |
SDG77669.1 | SDG77689.1 | SAMN05216553_111185 | SAMN05216553_111186 | 3' terminal RNA ribose 2'-O-methyltransferase Hen1. | Polynucleotide kinase-phosphatase. | 0.984 |
SDG77669.1 | SDG83751.1 | SAMN05216553_111185 | SAMN05216553_11221 | 3' terminal RNA ribose 2'-O-methyltransferase Hen1. | Phosphopantetheine attachment site. | 0.503 |
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