STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG93591.1Hypothetical protein. (164 aa)    
Predicted Functional Partners:
SDG93619.1
Hypothetical protein.
 
     0.786
SDG22669.1
Helix-turn-helix domain-containing protein.
  
     0.774
SDF58816.1
Hypothetical protein.
  
     0.773
SDF58887.1
EspG family protein.
  
     0.768
SDF68157.1
Hypothetical protein.
  
     0.765
SDF90823.1
Hypothetical protein.
  
     0.765
SDG77816.1
Hypothetical protein.
  
     0.763
SDG55098.1
YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
  
     0.761
SDF62604.1
Hypothetical protein.
  
     0.756
SDF55549.1
Hypothetical protein.
  
     0.756
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.