STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG98130.1Predicted ATP-binding protein involved in virulence. (413 aa)    
Predicted Functional Partners:
SDG98149.1
Hypothetical protein.
 
   
 0.954
SDG04274.1
Putative DNA-binding domain-containing protein.
  
    0.853
SDG98103.1
Protein of unknown function.
       0.757
SDG54697.1
Geranyl diphosphate 2-C-methyltransferase.
  
     0.712
SDF64513.1
ATP-dependent DNA helicase RecG.
 
    0.694
SDG31054.1
Hypothetical protein.
   
    0.664
SDG98079.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
     0.588
SDG98061.1
Multiple sugar transport system substrate-binding protein.
 
     0.563
SDF95388.1
N-6 DNA Methylase.
  
  
 0.561
SDG04236.1
Hypothetical protein.
  
  
 0.561
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.