STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH12974.1Hypothetical protein. (405 aa)    
Predicted Functional Partners:
SDH12953.1
Protein of unknown function.
 
     0.880
SDG09756.1
Peptidase family S41.
  
  0.779
SDH38487.1
Dehydratase.
  
     0.752
SDG51416.1
Endoglucanase.
    
  0.701
SDG58732.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
    
  0.701
SDF77997.1
Hypothetical protein.
  
     0.683
SDF31707.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
   
  0.677
SDF66579.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
   
  0.677
SDF77919.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
   
  0.677
SDF97517.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
   
  0.677
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.