STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH32878.1Catechol 2,3-dioxygenase. (167 aa)    
Predicted Functional Partners:
SDF36814.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.841
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.841
SDF98520.1
(2R)-ethylmalonyl-CoA mutase.
    
 0.825
SDH32902.1
Hypothetical protein.
       0.802
SDF64242.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.772
SDH32978.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
    
  0.745
SDH32946.1
Trans-2,3-dihydro-3-hydroxyanthranilate isomerase.
       0.742
SDH32919.1
Luciferase-like monooxygenase.
       0.727
SDF90359.1
methylmalonyl-CoA mutase.
    
 0.724
SDG85533.1
Carboxyl transferase domain-containing protein.
  
 
 0.709
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.