STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH57577.1Nitrogen fixation protein NifU. (146 aa)    
Predicted Functional Partners:
SDG37565.1
Cysteine desulfurase.
  
 0.999
SDH57527.1
Fe-S cluster assembly ATP-binding protein.
 
 
 0.998
SDH57550.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.998
SDH57593.1
Metal-sulfur cluster biosynthetic enzyme.
 
    0.994
SDH57488.1
Fe-S cluster assembly protein SufD.
 
 
 0.991
SDG31101.1
Selenocysteine lyase/Cysteine desulfurase.
 
 0.989
SDH57455.1
Fe-S cluster assembly protein SufB.
 
 
 0.989
SDG30625.1
Selenocysteine lyase/Cysteine desulfurase.
 
 0.987
SDG91120.1
Cysteine desulfurase family protein, VC1184 subfamily.
 
 0.986
SDH43306.1
Cysteine desulfurase.
 
 0.981
Your Current Organism:
Lechevalieria fradiae
NCBI taxonomy Id: 200378
Other names: AS 4.3506, CGMCC 4.3506, DSM 45099, JCM 14205, L. fradiae, Lechevalieria fradiae Zhang et al. 2007, strain Z6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.